STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB03925.1Putative peroxiredoxin bcp; Product inferred by homology to UniProt. (153 aa)    
Predicted Functional Partners:
CDB03926.1
uPF0246 protein HMPREF0673_01667; Product inferred by homology to UniProt; Belongs to the UPF0246 family.
 
    0.654
CDB04518.1
Transketolase thiamine diphosphate binding domain protein; Product inferred by homology to UniProt; Belongs to the transketolase family.
    
  0.513
CDB04262.1
Vitamin B12 dependent methionine synthase activation domain protein; Product inferred by homology to UniProt.
    
  0.504
CDB05235.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.504
CDB03927.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.425
CDB05321.1
Antioxidant AhpC/TSA family; Product inferred by homology to UniProt.
  
     0.414
CDB05847.1
Cytochrome c assembly protein; Product inferred by homology to UniProt.
  
  
 0.412
CDB04939.1
aTP-binding protein Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.402
Your Current Organism:
Prevotella sp. CAG520
NCBI taxonomy Id: 1262929
Other names: P. sp. CAG:520, Prevotella sp. CAG:520
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