STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB05286.1tonB-dependent receptor plug domain protein; Product inferred by homology to UniProt. (990 aa)    
Predicted Functional Partners:
CDB05285.1
susD family protein; Product inferred by homology to UniProt.
 
     0.930
CDB04442.1
tonB family protein; Product inferred by homology to UniProt.
  
  0.773
CDB03952.1
tonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  0.663
CDB04428.1
tonB-dependent receptor plug domain protein; Product inferred by homology to UniProt.
  
 
  0.647
CDB05905.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.645
guaA
gMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
  
  0.639
CDB03902.1
tonB-dependent receptor; Product inferred by homology to UniProt.
  
  0.636
CDB05851.1
tonB-dependent receptor; Product inferred by homology to UniProt.
  
     0.597
CDB05284.1
Conserved domain protein; Product inferred by homology to UniProt.
  
    0.567
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
  0.560
Your Current Organism:
Prevotella sp. CAG520
NCBI taxonomy Id: 1262929
Other names: P. sp. CAG:520, Prevotella sp. CAG:520
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.