STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCY16634.1Sigma-70 region 2; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)    
Predicted Functional Partners:
CCY16633.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.881
CCY16689.1
rNA polymerase sigma factor; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.769
CCY15081.1
Sigma-70 region 4; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.765
CCY15259.1
Sigma-70 region 2; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family.
  
     0.758
CCY15131.1
Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.725
CCY16635.1
Uncharacterized protein; Product inferred by homology to UniProt.
   
  0.650
rpoC
dNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.478
rpoB
dNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.476
CCY16051.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
   0.465
rpoA
dNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.465
Your Current Organism:
Prevotella sp. CAG755
NCBI taxonomy Id: 1262935
Other names: P. sp. CAG:755, Prevotella sp. CAG:755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.