STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA-2aBC-type cobalt transport system ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (285 aa)    
Predicted Functional Partners:
ecfT
aBC-type cobalt transport system permease component CbiQ and related transporters; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
CDF42341.1
Cobalamin biosynthesis protein CbiM; Product inferred by homology to UniProt.
  
 0.990
CDF41648.1
bioY protein; Product inferred by homology to UniProt.
 
 
 0.988
CDF43139.1
Putative cobalt ABC transporter permease protein; Product inferred by homology to UniProt.
 
 0.987
CDF42342.1
Cobalt transport protein; Product inferred by homology to UniProt.
  
 0.982
ecfA
Putative uncharacterized protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
0.981
CDF41532.1
Putative transporter; Product inferred by homology to UniProt.
  
 0.959
CDF42880.1
Cobalt transport protein; Product inferred by homology to UniProt.
  
 0.959
CDF42881.1
Cobalt transport protein; Product inferred by homology to UniProt.
  
 0.959
truA
tRNA pseudouridine synthase A 1; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.909
Your Current Organism:
Roseburia sp. CAG182
NCBI taxonomy Id: 1262942
Other names: R. sp. CAG:182, Roseburia sp. CAG:182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.