STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC95344.1Bacterial group 2 Ig-like protein; Product inferred by homology to UniProt. (235 aa)    
Predicted Functional Partners:
CDC95362.1
Carbohydrate binding domain protein; Product inferred by homology to UniProt.
  
  
  0.842
CDC95145.1
Ig domain protein group 2 domain protein; Product inferred by homology to UniProt.
  
     0.754
CDC95995.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.746
CDC95482.1
Ig domain protein group 2 domain protein; Product inferred by homology to UniProt.
  
     0.736
CDC94004.1
Dockerin type I repeat protein; Product inferred by homology to UniProt.
  
     0.700
CDC92961.1
Bacterial Ig-like domain (Group 2); Product inferred by homology to UniProt.
  
     0.689
CDC95446.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.679
CDC95959.1
Glycerophosphodiester phosphodiesterase family protein; Product inferred by homology to UniProt.
  
     0.655
CDC96564.1
Bacterial group 2 Ig-like protein; Product inferred by homology to UniProt.
  
  
  0.608
CDC95345.1
uDP-galactopyranose mutase; Product inferred by homology to UniProt.
       0.584
Your Current Organism:
Roseburia sp. CAG380
NCBI taxonomy Id: 1262946
Other names: R. sp. CAG:380, Roseburia sp. CAG:380
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.