STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ84246.1Putative uncharacterized protein; Product inferred by homology to UniProt. (523 aa)    
Predicted Functional Partners:
CCZ84247.1
aBC-type uncharacterized transport system; Product inferred by homology to UniProt.
 
     0.874
CCZ84461.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.769
CCZ84249.1
aBC-type multidrug transport system ATPase component; Product inferred by homology to UniProt.
 
     0.765
CCZ83933.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.761
CCZ84225.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.761
CCZ84248.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.760
CCZ84139.1
lysM domain; Product inferred by homology to UniProt.
  
     0.744
CCZ82797.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.742
CCZ83856.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.742
CCZ83900.1
Putative cell division protein FtsL; Product inferred by homology to UniProt.
  
     0.694
Your Current Organism:
Ruminococcus sp. CAG254
NCBI taxonomy Id: 1262953
Other names: R. sp. CAG:254, Ruminococcus sp. CAG:254
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.