Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCZ82981.1 | CCZ83026.1 | BN566_00103 | BN566_00819 | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exonuclease; Product inferred by homology to UniProt. | 0.895 |
| CCZ82981.1 | CCZ83370.1 | BN566_00103 | BN566_01146 | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | dNA polymerase III alpha subunit (Gram-positive type); Product inferred by homology to UniProt. | 0.958 |
| CCZ82981.1 | CCZ83594.1 | BN566_00103 | BN566_01357 | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | dNA polymerase III catalytic subunit DnaE type; Product inferred by homology to UniProt. | 0.994 |
| CCZ82981.1 | CCZ83637.1 | BN566_00103 | BN566_00164 | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative uncharacterized protein; Product inferred by homology to UniProt. | 0.983 |
| CCZ82981.1 | dnaX | BN566_00103 | BN566_00822 | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | dNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.994 |
| CCZ82981.1 | polC | BN566_00103 | BN566_01725 | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | dNA polymerase III polC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.940 |
| CCZ82981.1 | recR | BN566_00103 | BN566_00824 | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.585 |
| CCZ83026.1 | CCZ82981.1 | BN566_00819 | BN566_00103 | Exonuclease; Product inferred by homology to UniProt. | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.895 |
| CCZ83026.1 | CCZ83594.1 | BN566_00819 | BN566_01357 | Exonuclease; Product inferred by homology to UniProt. | dNA polymerase III catalytic subunit DnaE type; Product inferred by homology to UniProt. | 0.909 |
| CCZ83026.1 | CCZ83637.1 | BN566_00819 | BN566_00164 | Exonuclease; Product inferred by homology to UniProt. | Putative uncharacterized protein; Product inferred by homology to UniProt. | 0.838 |
| CCZ83026.1 | dnaX | BN566_00819 | BN566_00822 | Exonuclease; Product inferred by homology to UniProt. | dNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.838 |
| CCZ83026.1 | polC | BN566_00819 | BN566_01725 | Exonuclease; Product inferred by homology to UniProt. | dNA polymerase III polC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.554 |
| CCZ83030.1 | CCZ83637.1 | BN566_00823 | BN566_00164 | Nucleoid-associated protein RUM_22410; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Putative uncharacterized protein; Product inferred by homology to UniProt. | 0.453 |
| CCZ83030.1 | dnaX | BN566_00823 | BN566_00822 | Nucleoid-associated protein RUM_22410; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | dNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.812 |
| CCZ83030.1 | recR | BN566_00823 | BN566_00824 | Nucleoid-associated protein RUM_22410; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.974 |
| CCZ83197.1 | CCZ83594.1 | BN566_00980 | BN566_01357 | Single-stranded DNA-binding protein; Product inferred by homology to UniProt. | dNA polymerase III catalytic subunit DnaE type; Product inferred by homology to UniProt. | 0.873 |
| CCZ83197.1 | CCZ83637.1 | BN566_00980 | BN566_00164 | Single-stranded DNA-binding protein; Product inferred by homology to UniProt. | Putative uncharacterized protein; Product inferred by homology to UniProt. | 0.754 |
| CCZ83197.1 | dnaX | BN566_00980 | BN566_00822 | Single-stranded DNA-binding protein; Product inferred by homology to UniProt. | dNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.757 |
| CCZ83370.1 | CCZ82981.1 | BN566_01146 | BN566_00103 | dNA polymerase III alpha subunit (Gram-positive type); Product inferred by homology to UniProt. | dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.958 |
| CCZ83370.1 | CCZ83594.1 | BN566_01146 | BN566_01357 | dNA polymerase III alpha subunit (Gram-positive type); Product inferred by homology to UniProt. | dNA polymerase III catalytic subunit DnaE type; Product inferred by homology to UniProt. | 0.959 |
page 1 of 4