STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA92529.1Putative uncharacterized protein; Product inferred by homology to UniProt. (67 aa)    
Predicted Functional Partners:
CDA92530.1
Predicted SAM-dependent methyltransferase; Product inferred by homology to UniProt.
 
     0.839
CDA92531.1
Dinuclear metal center protein YbgI family; Product inferred by homology to UniProt.
       0.818
CDA92533.1
Fibronectin-binding protein; Product inferred by homology to UniProt.
       0.799
polA
dNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.773
CDA92538.1
Putative glyoxylate reductase; Product inferred by homology to UniProt; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.773
CDA92539.1
Ribosomal-protein-alanine acetyltransferase; Product inferred by homology to UniProt; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.773
tsaD
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.773
CDA89395.1
Rubredoxin; Product inferred by homology to UniProt.
  
  
 0.541
CDA92528.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.532
CDA91283.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.433
Your Current Organism:
Ruminococcus sp. CAG563
NCBI taxonomy Id: 1262961
Other names: R. sp. CAG:563, Ruminococcus sp. CAG:563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.