STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA74096.1Diguanylate cyclase/phosphodiesterase; Product inferred by homology to UniProt. (552 aa)    
Predicted Functional Partners:
CDA73900.1
Diguanylate cyclase; Product inferred by homology to UniProt.
 
 
 0.984
CDA74578.1
hD domain protein; Product inferred by homology to UniProt.
 
 
 0.963
CDA72729.1
Methyl-accepting chemotaxis protein signaling domain protein; Product inferred by homology to UniProt.
 
 0.916
CDA73511.1
Diguanylate cyclase (GGDEF) domain protein; Product inferred by homology to UniProt.
 
 
  0.805
CDA74169.1
Diguanylate phosphodiesterase; Product inferred by homology to UniProt.
  
 
  0.803
CDA71582.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein; Product inferred by homology to UniProt.
 
 
0.752
CDA74013.1
Diguanylate cyclase domain protein; Product inferred by homology to UniProt.
 
 
0.752
CDA74138.1
Diguanylate cyclase/phosphodiesterase; Product inferred by homology to UniProt.
 
 
0.744
CDA73986.1
Diguanylate cyclase (GGDEF) domain protein; Product inferred by homology to UniProt.
 
 
0.733
CDA72122.1
Methyltransferase CheR SAM binding domain protein; Product inferred by homology to UniProt.
 
  0.666
Your Current Organism:
Ruminococcus sp. CAG579
NCBI taxonomy Id: 1262963
Other names: R. sp. CAG:579, Ruminococcus sp. CAG:579
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