STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA72968.1Flavodoxins; Product inferred by homology to UniProt. (158 aa)    
Predicted Functional Partners:
CDA71277.1
Aldo/keto reductase; Product inferred by homology to UniProt.
     0.858
CDA72970.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
     0.857
CDA72966.1
Predicted permease; Product inferred by homology to UniProt.
  
 
  0.522
CDA72971.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.477
CDA72961.1
aBC-type antimicrobial peptide transport system ATPase component; Product inferred by homology to UniProt.
  
 
  0.433
CDA74339.1
Esterase/lipase-like protein; Product inferred by homology to UniProt.
  
     0.430
CDA71664.1
Efflux ABC transporter permease protein; Product inferred by homology to UniProt.
  
 
  0.404
Your Current Organism:
Ruminococcus sp. CAG579
NCBI taxonomy Id: 1262963
Other names: R. sp. CAG:579, Ruminococcus sp. CAG:579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.