STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF01438.1Putative uncharacterized protein; Product inferred by homology to UniProt. (139 aa)    
Predicted Functional Partners:
CDF01439.1
impB/MucB/SamB family protein; Product inferred by homology to UniProt.
 
    0.927
CDF01437.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
    
0.567
CDF00724.1
Bacterial membrane flanked domain; Product inferred by homology to UniProt.
  
     0.527
CDF00845.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.514
CDF02722.1
Small GTP-binding protein domain; Product inferred by homology to UniProt.
  
     0.454
CDF00413.1
Uncharacterized protein conserved in bacteria; Product inferred by homology to UniProt.
  
     0.432
CDF00740.1
Phage/plasmid primase P4 family C-terminal domain protein; Product inferred by homology to UniProt.
  
     0.407
CDF01434.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.406
Your Current Organism:
Ruminococcus sp. CAG624
NCBI taxonomy Id: 1262965
Other names: R. sp. CAG:624, Ruminococcus sp. CAG:624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.