STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ29682.1Exopolyphosphatase; Product inferred by homology to UniProt. (379 aa)    
Predicted Functional Partners:
CCZ29683.1
Exopolyphosphatase; Product inferred by homology to UniProt.
 
    
0.821
rlmE
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
       0.791
CCZ30782.1
(P)ppGpp synthetase I (GTP pyrophosphokinase) SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.739
CCZ29685.1
Glycosidases; Product inferred by homology to UniProt.
       0.645
CCZ29681.1
Modification methylase CcrmI; Product inferred by homology to UniProt; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.519
polA
dNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.490
CCZ29686.1
Unknown; No significant homology to UniProt.
       0.478
CCZ30364.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.428
CCZ29829.1
Cell division protein; Product inferred by homology to UniProt.
 
     0.409
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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