STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ29802.1Uncharacterized protein conserved in bacteria; Product inferred by homology to UniProt. (427 aa)    
Predicted Functional Partners:
lysS
lysine--tRNA ligase; Product inferred by homology to UniProt; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.705
CCZ31265.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.653
CCZ31267.1
Peptidase M23B; Product inferred by homology to UniProt.
 
   
 0.474
CCZ29804.1
Unknown; No significant homology to UniProt.
       0.468
CCZ31216.1
fliX protein; Product inferred by homology to UniProt.
  
     0.449
CCZ31137.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.425
CCZ30349.1
Peptidase M23; Product inferred by homology to UniProt.
  
     0.423
CCZ30414.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.422
CCZ30790.1
Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the flagella basal body rod proteins family.
    
   0.420
CCZ30672.1
Peptidase M23B; Product inferred by homology to UniProt.
  
     0.400
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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