STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ30177.1Protein containing DUF1013; Product inferred by homology to UniProt. (193 aa)    
Predicted Functional Partners:
rpmE
50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
      0.841
CCZ31177.1
Import inner membrane translocase subunit Tim44; Product inferred by homology to UniProt.
  
     0.766
CCZ30980.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
   
 0.761
recO
dNA repair protein RecO (Recombination protein O); Involved in DNA repair and RecF pathway recombination.
  
     0.749
CCZ31090.1
Superfamily I DNA and RNA helicase; Product inferred by homology to UniProt.
 
      0.747
CCZ29812.1
Ribosomal protein L11 methyltransferase; Product inferred by homology to UniProt.
 
      0.700
CCZ30711.1
Transcriptional regulator XRE family; Product inferred by homology to UniProt.
  
     0.689
CCZ30205.1
uPF0335 protein AZOLI_p40624; Product inferred by homology to UniProt.
  
   
 0.677
yidC
Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
     0.677
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.674
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.