STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ30278.1Putative uncharacterized protein; Product inferred by homology to UniProt. (110 aa)    
Predicted Functional Partners:
CCZ30277.1
Cupin 2 conserved barrel domain protein; Product inferred by homology to UniProt.
  
    0.557
CCZ30279.1
Protein AraJ; Product inferred by homology to UniProt.
       0.538
CCZ30926.1
fMN-dependent NADH-azoreductase; Product inferred by homology to UniProt.
 
   
 0.422
cobB
nAD-dependent deacetylase; Product inferred by homology to UniProt; Belongs to the sirtuin family. Class III subfamily.
  
    0.415
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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