STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ30325.1hflK; HflC and HflK could encode or regulate a protease. (361 aa)    
Predicted Functional Partners:
CCZ30326.1
Protease modulator; HflC and HflK could regulate a protease.
 
0.999
ftsH
aTP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.981
CCZ30327.1
Peptidase S1C Do; Product inferred by homology to UniProt; Belongs to the peptidase S1C family.
  
 
 0.845
hflX
gTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
  
 0.843
CCZ30328.1
dNA polymerase III chi subunit HolC; Product inferred by homology to UniProt.
       0.773
CCZ30717.1
nAD(FAD)-dependent dehydrogenase; Product inferred by homology to UniProt.
   
 
 0.703
CCZ30324.1
aTPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
   0.663
yidC
Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
 
 0.637
CCZ30947.1
Predicted Zn-dependent peptidase; Product inferred by homology to UniProt; Belongs to the peptidase M16 family.
   
 0.613
CCZ30029.1
Peptidase M16 putative; Product inferred by homology to UniProt.
   
 0.613
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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