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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ30949.1Putative uncharacterized protein; Product inferred by homology to UniProt. (355 aa)    
Predicted Functional Partners:
CCZ30621.1
pIF1 helicase; Product inferred by homology to UniProt.
  
 
  0.799
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.773
CCZ30947.1
Predicted Zn-dependent peptidase; Product inferred by homology to UniProt; Belongs to the peptidase M16 family.
       0.746
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.746
CCZ30951.1
Unknown; No significant homology to UniProt.
       0.547
CCZ30946.1
thiJ/PfpI; Product inferred by homology to UniProt.
       0.531
CCZ30120.1
Tia invasion determinant; Product inferred by homology to UniProt.
   
    0.506
CCZ30935.1
Carbohydrate-selective porin OprB family; Product inferred by homology to UniProt.
   
    0.506
CCZ29861.1
Surface antigen msp4 family protein; Product inferred by homology to UniProt.
   
    0.506
CCZ29952.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
    0.506
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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