STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ31055.1Unknown; No significant homology to UniProt. (145 aa)    
Predicted Functional Partners:
CCZ30571.1
Sensor histidine kinase; Product inferred by homology to UniProt.
    
 0.786
CCZ29951.1
pAS/PAC sensor hybrid histidine kinase; Product inferred by homology to UniProt.
    
 0.786
CCZ31054.1
Uncharacterized protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.773
CCZ31056.1
Unknown; No significant homology to UniProt.
       0.773
CCZ30743.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Product inferred by homology to UniProt.
  
  
 0.507
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.505
CCZ30327.1
Peptidase S1C Do; Product inferred by homology to UniProt; Belongs to the peptidase S1C family.
    
 0.436
CCZ30641.1
Cell wall-associated hydrolase; Product inferred by homology to UniProt.
  
 
 0.400
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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