STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ31255.1Putative uncharacterized protein; Product inferred by homology to UniProt. (170 aa)    
Predicted Functional Partners:
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.
       0.800
CCZ31071.1
Periplasmic protein TonB; Product inferred by homology to UniProt.
  
     0.770
CCZ29700.1
Periplasmic protein TonB; Product inferred by homology to UniProt.
  
     0.718
CCZ31177.1
Import inner membrane translocase subunit Tim44; Product inferred by homology to UniProt.
  
     0.707
CCZ31092.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
    0.696
CCZ30807.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.685
CCZ29944.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.677
CCZ30979.1
Uncharacterized arylsulfate sulfotransferase-like protein; Product inferred by homology to UniProt.
  
     0.643
CCZ29858.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.618
CCZ29754.1
Organic solvent tolerance protein OstA; Product inferred by homology to UniProt.
  
     0.615
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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