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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ31327.1Two component transcriptional regulator LuxR family; Product inferred by homology to UniProt. (224 aa)    
Predicted Functional Partners:
CCZ29768.1
Signal transduction histidine kinase; Product inferred by homology to UniProt.
  
 0.990
CCZ29951.1
pAS/PAC sensor hybrid histidine kinase; Product inferred by homology to UniProt.
 
 0.990
CCZ30571.1
Sensor histidine kinase; Product inferred by homology to UniProt.
  
 0.988
CCZ29712.1
Diguanylate cyclase with PAS/PAC sensor; Product inferred by homology to UniProt.
  
 0.959
CCZ30155.1
Putative diguanylate cyclase GGDEF domain; Product inferred by homology to UniProt.
  
 0.946
CCZ31061.1
pAS/PAC sensor signal transduction histidine kinase; Product inferred by homology to UniProt.
   
 0.937
CCZ31302.1
Tetratricopeptide repeat family; Product inferred by homology to UniProt.
    
 0.929
CCZ31329.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
    0.774
CCZ31328.1
Unknown; No significant homology to UniProt.
       0.773
CCZ31326.1
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
 
     0.760
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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