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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ31357.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (363 aa)    
Predicted Functional Partners:
murF
uDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 0.986
ddl
d-alanine--D-alanine ligase 14; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
 
 0.904
CCZ30597.1
Similar to UDP-N-acetylmuramate:L-alanine ligase MurC; Product inferred by homology to UniProt.
 
  
 0.860
murE
uDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
  
 0.855
CCZ30106.1
acyl-CoA synthetase/AMP-acid ligase II; Product inferred by homology to UniProt.
    
 0.817
murB
uDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
 0.803
CCZ31299.1
Putative Glycoprotease family protein; Product inferred by homology to UniProt.
    
  0.803
tsaD
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
    
  0.803
CCZ31274.1
nH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
    
  0.802
CCZ31240.1
aTPase or kinase; Product inferred by homology to UniProt.
  
 
  0.800
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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