STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ29707.1Protein hit; Product inferred by homology to UniProt. (133 aa)    
Predicted Functional Partners:
CCZ31264.1
rNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family.
  
 0.811
CCZ30770.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
  
   0.772
CCZ30705.1
Thiol:disulfide interchange protein putative; Product inferred by homology to UniProt.
   
  0.755
rpoC
dNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  0.734
CCZ31198.1
Type I phosphodiesterase/nucleotide pyrophosphatase; Product inferred by homology to UniProt.
     
 0.719
rpoZ
dNA-directed RNA polymerase subunit omega 1; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
 
  0.631
rpoB
dNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.621
CCZ29706.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.542
CCZ30746.1
dEAD/DEAH box helicase; Product inferred by homology to UniProt.
   
 
  0.539
CCZ29880.1
dEAD/DEAH box helicase family protein; Product inferred by homology to UniProt.
   
 
  0.539
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.