STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ29973.1Peptide ABC transporter ATP-binding protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily. (525 aa)    
Predicted Functional Partners:
CCZ29972.1
Binding-protein-dependent transport systems inner membrane component; Product inferred by homology to UniProt.
 
 0.998
CCZ31304.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 
 
 0.964
CCZ31305.1
aBC-type oligopeptide transport system periplasmic component; Product inferred by homology to UniProt.
 
 
 0.916
CCZ31286.1
Putative ABC transporter ATP-binding protein; Product inferred by homology to UniProt.
 
     
0.899
CCZ29971.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.752
CCZ29974.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.737
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
       0.483
CCZ30734.1
Macrolide export ATP-binding/permease protein MacB; Product inferred by homology to UniProt.
 
 
    0.411
Your Current Organism:
Proteobacteria bacterium CAG495
NCBI taxonomy Id: 1262987
Other names: P. bacterium CAG:495, Proteobacteria bacterium CAG:495
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