STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06768.1Accessory gene regulator B; Product inferred by homology to UniProt. (193 aa)    
Predicted Functional Partners:
CDF06445.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
  0.786
CDF08173.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
  0.775
CDF06767.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
  0.726
CDF06769.1
Unknown; No significant homology to UniProt.
       0.664
CDF06166.1
Signal transduction histidine kinase regulating citrate/malate metabolism; Product inferred by homology to UniProt.
 
  
  0.663
CDF06766.1
Response regulator of the LytR/AlgR family; Product inferred by homology to UniProt.
 
    0.629
CDF06727.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
  0.553
CDF06444.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.528
CDF07402.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
  0.508
CDF08262.1
lytTr DNA-binding domain; Product inferred by homology to UniProt.
     
 0.501
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.