STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF08245.1glycine/D-amino acid oxidase deaminating; Product inferred by homology to UniProt. (105 aa)    
Predicted Functional Partners:
CDF07747.1
Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt.
  
 0.990
CDF07878.1
Vitamin B12-dependent methionine synthase family protein; Product inferred by homology to UniProt.
   
 
 0.894
CDF06762.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.875
CDF07334.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 
 0.824
CDF08082.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 
  0.816
CDF06800.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 
  0.816
CDF08407.1
Aldehyde dehydrogenase; Product inferred by homology to UniProt; Belongs to the aldehyde dehydrogenase family.
  
 
 0.794
CDF08617.1
Isocitrate dehydrogenase [NADP]; Product inferred by homology to UniProt; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.789
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.787
CDF07720.1
Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt.
 
  
 0.785
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.