STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF08271.1Uncharacterized protein; Product inferred by homology to UniProt. (174 aa)    
Predicted Functional Partners:
CDF06902.1
Sugar fermentation stimulation protein homolog; Adenine glycosylase active on G-A mispairs.
    
 0.886
CDF06765.1
Exodeoxyribonuclease III; Product inferred by homology to UniProt.
  
 
 0.800
CDF06410.1
endonuclease/Exonuclease/phosphatase family; Product inferred by homology to UniProt.
  
 
 0.793
CDF08567.1
Radical SAM domain protein; Product inferred by homology to UniProt.
      0.677
CDF08468.1
Conserved hypothetical radical SAM protein; Product inferred by homology to UniProt.
 
      0.650
CDF08721.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
      0.591
CDF08272.1
cobW/P47K family protein; Product inferred by homology to UniProt.
       0.547
CDF07275.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 
  0.531
CDF08270.1
pP-loop family protein; Product inferred by homology to UniProt; Belongs to the TtcA family.
       0.516
CDF08273.1
Beta-galactosidase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 2 family.
       0.511
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.