STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF08388.1Putative membrane protein; Product inferred by homology to UniProt. (525 aa)    
Predicted Functional Partners:
CDF08268.1
Predicted esterase; Product inferred by homology to UniProt.
    
  0.624
CDF07807.1
Product inferred by homology to UniProt.
  
 
  0.552
CDF08463.1
Polysaccharide deacetylase; Product inferred by homology to UniProt.
  
 
  0.509
CDF07226.1
Polysaccharide deacetylase Est4C; Product inferred by homology to UniProt.
  
 
  0.509
CDF07785.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
  0.509
CDF07999.1
Predicted xylanase/chitin deacetylase; Product inferred by homology to UniProt.
  
 
  0.509
CDF08090.1
Glycosyl transferase GT2 family; Product inferred by homology to UniProt.
  
 
 0.452
CDF07912.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
     
 0.452
CDF07679.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
  
  0.451
CDF06570.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; Product inferred by homology to UniProt.
 
  
  0.449
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.