STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF08468.1Conserved hypothetical radical SAM protein; Product inferred by homology to UniProt. (324 aa)    
Predicted Functional Partners:
CDF08467.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.807
CDF08469.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.799
CDF06458.1
Radical SAM domain protein; Product inferred by homology to UniProt.
     0.665
CDF08271.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
      0.650
CDF06747.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.429
CDF08470.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.407
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.