STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF08507.1Methyl-accepting chemotaxis protein; Product inferred by homology to UniProt. (563 aa)    
Predicted Functional Partners:
CDF06462.1
Chemotaxis protein CheW; Product inferred by homology to UniProt.
 
 0.995
CDF07211.1
Chemotaxis protein CheA; Product inferred by homology to UniProt.
 
 0.980
CDF08342.1
Multidomain signal transduction protein (GGDEF and EAL domains); Product inferred by homology to UniProt.
 
 0.942
CDF07212.1
Chemotaxis signal transduction protein; Product inferred by homology to UniProt.
 
  0.936
CDF07210.1
Chemotaxis response regulator protein-glutamate methylesterase; Product inferred by homology to UniProt.
 
 0.899
CDF08640.1
mCP methyltransferase CheR-type; Product inferred by homology to UniProt.
 
 0.897
CDF08726.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.871
CDF08262.1
lytTr DNA-binding domain; Product inferred by homology to UniProt.
  
 0.866
cheD
Probable chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.861
CDF06164.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 0.818
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.