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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06125.1sCP-2 sterol transfer family; Product inferred by homology to UniProt. (335 aa)    
Predicted Functional Partners:
CDF07741.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
    
  0.821
queA
s-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
    
 0.791
CDF06124.1
Diadenosine tetraphosphate; Product inferred by homology to UniProt.
       0.747
tgt
Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]
  
 
 0.744
CDF06123.1
Fumarate hydratase class I; Product inferred by homology to UniProt.
       0.732
CDF08469.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.701
CDF08408.1
Alcohol dehydrogenase iron-dependent; Product inferred by homology to UniProt.
   
 
  0.658
CDF08407.1
Aldehyde dehydrogenase; Product inferred by homology to UniProt; Belongs to the aldehyde dehydrogenase family.
     
 0.652
pgi
Glucose-6-phosphate isomerase; Product inferred by homology to UniProt; Belongs to the GPI family.
    
  0.626
CDF06122.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.597
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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