STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06411.1arsR family transcriptional regulator; Product inferred by homology to UniProt. (118 aa)    
Predicted Functional Partners:
CDF06412.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
 0.949
CDF06413.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
 0.862
CDF07466.1
Cation transport ATPase; Product inferred by homology to UniProt.
 
  
 0.758
CDF07868.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.694
CDF06220.1
birA biotin-[acetyl-CoA-carboxylase] ligase region; Product inferred by homology to UniProt.
     
 0.683
folE
gTP cyclohydrolase 1; Product inferred by homology to UniProt.
   
 
 0.683
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.683
CDF06940.1
Heavy metal translocating P-type ATPase; Product inferred by homology to UniProt.
 
  
 0.666
nadK
Probable inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.664
CDF06375.1
Cystathionine beta-lyases/cystathionine gamma-synthases; Product inferred by homology to UniProt.
   
 
  0.632
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.