STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06525.1nUDIX domain-containing protein; Product inferred by homology to UniProt. (160 aa)    
Predicted Functional Partners:
CDF06004.1
Putative uncharacterized protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
 0.812
CDF07741.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
    
  0.795
CDF07878.1
Vitamin B12-dependent methionine synthase family protein; Product inferred by homology to UniProt.
    
 0.747
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
 
  
  0.711
CDF06526.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.645
CDF06527.1
parB domain-containing protein nuclease; Product inferred by homology to UniProt.
       0.645
CDF06528.1
Acetyltransferase GNAT family; Product inferred by homology to UniProt.
       0.645
CDF07261.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.621
CDF06164.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
  0.596
CDF08167.1
nH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
    
 0.587
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.