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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06605.1Putative uncharacterized protein; Product inferred by homology to UniProt. (157 aa)    
Predicted Functional Partners:
CDF07747.1
Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt.
    
  0.826
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.762
CDF07802.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.754
CDF06375.1
Cystathionine beta-lyases/cystathionine gamma-synthases; Product inferred by homology to UniProt.
   
 
 0.715
secD
Putative uncharacterized protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
   
 
  0.694
CDF08264.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.693
CDF06604.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.675
CDF08239.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 
  0.673
CDF08245.1
glycine/D-amino acid oxidase deaminating; Product inferred by homology to UniProt.
   
 
  0.663
CDF07261.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
     
 0.652
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.