STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06620.1Methyltransferase type 12; Product inferred by homology to UniProt. (317 aa)    
Predicted Functional Partners:
CDF08777.1
Surfactin synthetase B; Product inferred by homology to UniProt; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.832
CDF08087.1
Glycosyl transferase GT2 family; Product inferred by homology to UniProt.
  
 0.793
CDF08089.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.793
CDF07878.1
Vitamin B12-dependent methionine synthase family protein; Product inferred by homology to UniProt.
    
 0.755
CDF08803.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
 0.736
CDF07766.1
Glycosyl transferase family 2; Product inferred by homology to UniProt.
   
 0.715
CDF07843.1
Geranyltranstransferase; Product inferred by homology to UniProt; Belongs to the FPP/GGPP synthase family.
  
 
 0.696
CDF07763.1
Methyltransferase FkbM family; Product inferred by homology to UniProt.
    
 0.684
CDF08836.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.675
CDF06832.1
3-oxoacyl-(Acyl-carrier-protein) reductase; Product inferred by homology to UniProt; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.661
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.