STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06699.1Putative uncharacterized protein; Product inferred by homology to UniProt. (513 aa)    
Predicted Functional Partners:
CDF08262.1
lytTr DNA-binding domain; Product inferred by homology to UniProt.
   
 0.987
CDF08342.1
Multidomain signal transduction protein (GGDEF and EAL domains); Product inferred by homology to UniProt.
  
 0.944
CDF06597.1
3-hydroxybutyryl-CoA dehydratase; Product inferred by homology to UniProt; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.938
CDF06462.1
Chemotaxis protein CheW; Product inferred by homology to UniProt.
   
 0.878
CDF07617.1
Metal dependent phosphohydrolase; Product inferred by homology to UniProt.
  
 0.875
CDF06164.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.870
CDF08726.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.865
CDF08384.1
Ammonium transporter Amt; Product inferred by homology to UniProt; Belongs to the P(II) protein family.
   
 0.806
CDF07741.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
   
  0.765
CDF06538.1
aBC-type transport system involved in lipoprotein release permease component; Product inferred by homology to UniProt.
 
 0.759
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.