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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06744.1Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the UPF0342 family. (110 aa)    
Predicted Functional Partners:
rnj
Putative uncharacterized protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.739
CDF06746.1
O-methyltransferase family protein; Product inferred by homology to UniProt.
       0.675
CDF06745.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.659
CDF06740.1
uPF0297 protein bpr_I2617; Product inferred by homology to UniProt; Belongs to the UPF0297 family.
  
    0.483
CDF06747.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.482
CDF06741.1
Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.480
CDF06742.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.473
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.