STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF06970.1alpha-N-arabinofuranosidase; Product inferred by homology to UniProt. (449 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.784
CDF06280.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
  
 
0.748
CDF07156.1
alpha-L-arabinofuranosidase; Product inferred by homology to UniProt.
  
 
 
0.728
CDF07997.1
Xylanase; Product inferred by homology to UniProt.
 
  
 0.698
uxaC
Uronate isomerase; Product inferred by homology to UniProt.
     
 0.697
CDF06783.1
Beta-xylosidase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.669
CDF07550.1
Product inferred by homology to UniProt.
    
 0.571
CDF06969.1
Unknown; No significant homology to UniProt.
       0.548
CDF08239.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.486
CDF08392.1
Glycosyl hydrolase family 9; Product inferred by homology to UniProt.
  
 
  0.468
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.