STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF07078.1Threonine dehydratase; Product inferred by homology to UniProt. (407 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase; Product inferred by homology to UniProt; Belongs to the IlvD/Edd family.
  
 0.969
CDF07878.1
Vitamin B12-dependent methionine synthase family protein; Product inferred by homology to UniProt.
  
 0.927
CDF08626.1
Threonine synthase; Product inferred by homology to UniProt.
  
 
 0.917
CDF08354.1
Acetolactate synthase small subunit; Product inferred by homology to UniProt.
  
 
 0.906
CDF08355.1
Acetolactate synthase small subunit; Product inferred by homology to UniProt.
  
 
 0.906
CDF06327.1
Branched-chain amino acid aminotransferase; Product inferred by homology to UniProt.
  
 
 0.886
CDF06617.1
Homoserine dehydrogenase; Product inferred by homology to UniProt.
  
 
 0.872
CDF06646.1
Endoribonuclease L-PSP; Product inferred by homology to UniProt.
 
 0.869
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 
 0.847
CDF06619.1
Aspartokinase; Product inferred by homology to UniProt; Belongs to the aspartokinase family.
  
 0.828
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.