STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF07347.1aBC transporter permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family. (333 aa)    
Predicted Functional Partners:
CDF07346.1
Inner-membrane translocator; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
CDF07345.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
 
 0.997
CDF07344.1
Bmp family protein; Product inferred by homology to UniProt.
 
 
 0.985
CDF07535.1
aBC-type sugar transport system ATPase component; Product inferred by homology to UniProt.
  
  0.838
CDF08723.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
  
  0.770
CDF07161.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
  0.748
CDF07779.1
Xylose ABC transporter ATP-binding protein; Product inferred by homology to UniProt.
  
  0.730
CDF07499.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
     
  0.606
CDF08559.1
aBC transporter permease protein; Product inferred by homology to UniProt.
   
 
  0.464
CDF08750.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 
  0.464
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.