STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF07408.1Putative uncharacterized protein; Product inferred by homology to UniProt. (128 aa)    
Predicted Functional Partners:
CDF07409.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
 0.988
CDF07411.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.667
CDF07613.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.595
CDF08406.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.593
CDF08470.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.591
CDF06148.1
eDD domain protein DegV family; Product inferred by homology to UniProt.
 
    0.577
CDF06740.1
uPF0297 protein bpr_I2617; Product inferred by homology to UniProt; Belongs to the UPF0297 family.
  
    0.567
recG
aTP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.550
CDF06564.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.503
CDF06306.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
  
 0.489
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.