STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF07557.1Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Product inferred by homology to UniProt. (449 aa)    
Predicted Functional Partners:
CDF06294.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.935
CDF07556.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.864
CDF07558.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 
     0.799
CDF07559.1
Putative sugar ABC transporter permease protein; Product inferred by homology to UniProt.
 
     0.735
CDF08407.1
Aldehyde dehydrogenase; Product inferred by homology to UniProt; Belongs to the aldehyde dehydrogenase family.
  
 
 0.714
CDF08182.1
Transcriptional regulator; Product inferred by homology to UniProt.
  
 
 0.696
CDF07843.1
Geranyltranstransferase; Product inferred by homology to UniProt; Belongs to the FPP/GGPP synthase family.
  
 
 0.689
CDF06597.1
3-hydroxybutyryl-CoA dehydratase; Product inferred by homology to UniProt; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.647
CDF08526.1
Methylase involved in ubiquinone/menaquinone biosynthesis; Product inferred by homology to UniProt.
   
 
 0.622
CDF06620.1
Methyltransferase type 12; Product inferred by homology to UniProt.
   
 
 0.622
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.