STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF07600.1Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the peptidase S11 family. (204 aa)    
Predicted Functional Partners:
CDF06454.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.760
CDF06715.1
Bacterial surface proteins containing Ig-like domains; Product inferred by homology to UniProt.
   
 
 0.713
CDF07417.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
 
 0.713
CDF06215.1
Cell wall hydrolase; Product inferred by homology to UniProt.
 
  
  0.688
CDF07655.1
Penicillin-binding protein 1A family Pbp1A; Product inferred by homology to UniProt.
  
 
 0.688
CDF08125.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
 0.654
murF
uDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.653
CDF07171.1
erfK/YbiS/YcfS/YnhG family protein; Product inferred by homology to UniProt.
    
 0.651
CDF08480.1
Penicillin-binding protein PbpA1; Product inferred by homology to UniProt.
  
 
 0.648
CDF07403.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.648
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.