STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase; Product inferred by homology to UniProt. (491 aa)    
Predicted Functional Partners:
CDF07792.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    0.968
CDF07791.1
L-fucose isomerase and related proteins; Product inferred by homology to UniProt.
 
 
 0.948
CDF06610.1
Class II aldolase/adducin family protein; Product inferred by homology to UniProt.
 
 0.913
CDF06731.1
Ribulose-phosphate 3-epimerase; Product inferred by homology to UniProt; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.868
araB
Ribulokinase; Product inferred by homology to UniProt.
 
 
0.823
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
0.812
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.796
CDF08240.1
Fucose dissimilation pathway protein FucU; Product inferred by homology to UniProt; Belongs to the RbsD / FucU family.
  
 
 0.784
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
   
 0.780
CDF06602.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.773
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.