STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF07972.1Cell envelope-related transcriptional attenuator; Product inferred by homology to UniProt. (386 aa)    
Predicted Functional Partners:
CDF07973.1
Sortase B family protein; Product inferred by homology to UniProt.
 
     0.843
CDF07970.1
Polysaccharide biosynthesis protein; Product inferred by homology to UniProt.
  
  
 0.571
CDF07974.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.565
CDF07969.1
Polysaccharide export protein; Product inferred by homology to UniProt.
  
  
 0.541
CDF07968.1
Polysaccharide biosynthesis protein; Product inferred by homology to UniProt.
  
  
 0.529
CDF07730.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.463
CDF07733.1
Transglutaminase domain-containing protein; Product inferred by homology to UniProt.
  
     0.438
CDF07975.1
Transcriptional regulator AraC family; Product inferred by homology to UniProt.
       0.424
CDF06161.1
Putative uncharacterized protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.401
CDF07976.1
Integral membrane sensor signal transduction histidine kinase; Product inferred by homology to UniProt.
       0.401
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.