STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC93722.1Putative uncharacterized protein; Product inferred by homology to UniProt. (477 aa)    
Predicted Functional Partners:
CDC93715.1
nAD dependent epimerase/dehydratase family protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.966
CDC93723.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
     0.916
CDC93724.1
Glycosyltransferase group 1 family protein; Product inferred by homology to UniProt.
 
     0.868
CDC93720.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
    0.756
CDC92614.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.751
CDC93725.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
  0.712
CDC93717.1
Pentatricopeptide repeat domain-containing protein; Product inferred by homology to UniProt.
       0.697
CDC93752.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.694
CDC91593.1
Predicted glycosyltransferases; Product inferred by homology to UniProt.
  
 0.691
glgB
1 4-alpha-glucan branching enzyme GlgB 2; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.674
Your Current Organism:
Firmicutes bacterium CAG227
NCBI taxonomy Id: 1263010
Other names: F. bacterium CAG:227, Firmicutes bacterium CAG:227
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