STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC94509.1Putative uncharacterized protein; Product inferred by homology to UniProt. (180 aa)    
Predicted Functional Partners:
CDC93672.1
Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.767
CDC94508.1
rNA polymerase sigma-54 factor; Product inferred by homology to UniProt.
       0.727
CDC94247.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.657
CDC92705.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.642
CDC93196.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.637
CDC91701.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.600
CDC92020.1
xaa-Pro dipeptidase family enzyme; Product inferred by homology to UniProt.
  
     0.546
CDC93655.1
Predicted protein; Product inferred by homology to UniProt.
  
     0.540
CDC94128.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.492
CDC94276.1
Pterin binding enzyme; Product inferred by homology to UniProt.
  
     0.463
Your Current Organism:
Firmicutes bacterium CAG227
NCBI taxonomy Id: 1263010
Other names: F. bacterium CAG:227, Firmicutes bacterium CAG:227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.