STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD21285.1Putative uncharacterized protein; Product inferred by homology to UniProt. (261 aa)    
Predicted Functional Partners:
ispF
2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). Belongs to the IspF family. In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
  
    0.800
CDD21283.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.799
CDD21284.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.775
CDD21286.1
Unknown; No significant homology to UniProt.
       0.768
CDD21177.1
Phosphoglucomutase; Product inferred by homology to UniProt.
   
 
 0.708
CDD21288.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.600
CDD22106.1
Putative membrane protein; Product inferred by homology to UniProt.
 
     0.548
mutS2
mutS2 protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.530
CDD21292.1
Germination specific N-acetylmuramoyl-L-alanine amidase; Product inferred by homology to UniProt.
 
     0.516
CDD21282.1
Negative regulator of genetic competence ClpC/mecB; Product inferred by homology to UniProt; Belongs to the ClpA/ClpB family.
       0.500
Your Current Organism:
Firmicutes bacterium CAG313
NCBI taxonomy Id: 1263017
Other names: F. bacterium CAG:313, Firmicutes bacterium CAG:313
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.