STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD48195.1Putative uncharacterized protein; Product inferred by homology to UniProt. (168 aa)    
Predicted Functional Partners:
CDD47837.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.742
CDD46309.1
Radical SAM domain protein; Product inferred by homology to UniProt.
  
     0.701
CDD48196.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.696
CDD46054.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.694
CDD47446.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.688
CDD47538.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.684
CDD46563.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.681
CDD46810.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.678
CDD48960.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.674
CDD46303.1
Conserved domain protein; Product inferred by homology to UniProt.
  
     0.665
Your Current Organism:
Firmicutes bacterium CAG534
NCBI taxonomy Id: 1263027
Other names: F. bacterium CAG:534, Firmicutes bacterium CAG:534
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.