CCX72170.1 protein (Firmicutes bacterium CAG555)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CCX72170.1

Unknown; No significant homology to UniProt. (52 aa)

Predicted Functional Partners:

CCX72169.1

0.524

CCX72168.1

0.507

Your Current Organism:

Firmicutes bacterium CAG555

NCBI taxonomy Id: 1263030
Other names: F. bacterium CAG:555, Firmicutes bacterium CAG:555

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCX72168.1	CCX72169.1	BN705_01301	BN705_01302	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	0.940
CCX72168.1	CCX72170.1	BN705_01301	BN705_01303	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	Unknown; No significant homology to UniProt.	0.507
CCX72169.1	CCX72168.1	BN705_01302	BN705_01301	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	0.940
CCX72169.1	CCX72170.1	BN705_01302	BN705_01303	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	Unknown; No significant homology to UniProt.	0.524
CCX72170.1	CCX72168.1	BN705_01303	BN705_01301	Unknown; No significant homology to UniProt.	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	0.507
CCX72170.1	CCX72169.1	BN705_01303	BN705_01302	Unknown; No significant homology to UniProt.	dNA-binding helix-turn-helix protein; Product inferred by homology to UniProt.	0.524