STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_00036.1Aldo keto reductase. (336 aa)    
Predicted Functional Partners:
LCOR_00454.1
Voltage-gated potassium channel.
    
 0.805
LCOR_04437.1
Uncharacterized protein.
    
 0.762
LCOR_08002.1
MIT domain-containing protein.
    
 0.762
LCOR_11035.1
Wd40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.753
LCOR_10511.1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.750
LCOR_10049.1
Tryptophan synthase.
    
 0.745
LCOR_00829.1
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
    
 0.733
LCOR_01480.1
RRM Nup35-type domain-containing protein.
    
 0.699
LCOR_00959.1
Nucleoporin nup189.
    
 0.699
LCOR_07005.1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.692
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.